+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | Module | Module params | Input | Output | Param count | Param bytes | +==================================================================================================================================================================================+==================================+============================================================================================================================================================================================================================================================================================+=============================================================================================================================================================================================================================================================+===============+===============+ | alphafold (AlphaFold) | | {'aatype': s32[631], | {'distogram': {'bin_edges': f32[63], 'logits': f32[631,631,64]}, | 93,223,705 | 372.89 MB | | | | 'all_atom_mask': s32[631,37], | 'experimentally_resolved': {'logits': f32[631,37]}, | | | | | | 'all_atom_positions': f32[631,37,3], | 'masked_msa': {'logits': f32[252,631,22]}, | | | | | | 'assembly_num_chains': s32[], | 'predicted_aligned_error': {'asym_id': f32[631], | | | | | | 'asym_id': f32[631], | 'breaks': f32[63], | | | | | | 'bert_mask': f32[6143,631], | 'logits': f32[631,631,64]}, | | | | | | 'cluster_bias_mask': f32[6143], | 'predicted_lddt': {'logits': f32[631,50]}, | | | | | | 'deletion_matrix': f32[6143,631], | 'structure_module': {'final_atom_mask': f32[631,37], | | | | | | 'deletion_mean': f32[631], | 'final_atom_positions': f32[631,37,3]}} | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]} | | | | | | | is_training=False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration (AlphaFoldIteration) | | batch={'aatype': s32[631], | {'distogram': {'bin_edges': f32[63], 'logits': f32[631,631,64]}, | 93,223,705 | 372.89 MB | | └ alphafold (AlphaFold) | | 'all_atom_mask': s32[631,37], | 'experimentally_resolved': {'logits': f32[631,37]}, | | | | | | 'all_atom_positions': f32[631,37,3], | 'masked_msa': {'logits': f32[252,631,22]}, | | | | | | 'assembly_num_chains': s32[], | 'predicted_aligned_error': {'asym_id': f32[631], | | | | | | 'asym_id': f32[631], | 'breaks': f32[63], | | | | | | 'bert_mask': f32[6143,631], | 'logits': f32[631,631,64]}, | | | | | | 'cluster_bias_mask': f32[6143], | 'predicted_lddt': {'logits': f32[631,50]}, | | | | | | 'deletion_matrix': f32[6143,631], | 'representations': {'msa': f32[252,631,256], | | | | | | 'deletion_mean': f32[631], | 'msa_first_row': f32[631,256], | | | | | | 'entity_id': f32[631], | 'pair': f32[631,631,128], | | | | | | 'entity_mask': s32[631], | 'single': f32[631,384], | | | | | | 'msa': s32[6143,631], | 'structure_module': f32[631,384]}, | | | | | | 'msa_mask': f32[6143,631], | 'structure_module': {'final_atom_mask': f32[631,37], | | | | | | 'num_alignments': s32[], | 'final_atom_positions': f32[631,37,3]}} | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, is_training=False, safe_key= | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | {'aatype': s32[631], | {'msa': f32[252,631,256], | 91,095,744 | 364.38 MB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'all_atom_mask': s32[631,37], | 'msa_first_row': f32[631,256], | | | | └ alphafold (AlphaFold) | | 'all_atom_positions': f32[631,37,3], | 'pair': f32[631,631,128], | | | | | | 'assembly_num_chains': s32[], | 'single': f32[631,384]} | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/preprocess_1d (Linear) | weights: f32[21,256] | f32[631,21] | f32[631,256] | 5,632 | 22.53 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/preprocess_msa (Linear) | weights: f32[49,256] | f32[252,631,49] | f32[252,631,256] | 12,800 | 51.20 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/left_single (Linear) | weights: f32[21,128] | f32[631,21] | f32[631,128] | 2,816 | 11.26 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/right_single (Linear) | weights: f32[21,128] | f32[631,21] | f32[631,128] | 2,816 | 11.26 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_pos_linear (Linear) | weights: f32[15,128] | f32[631,631,15] | f32[631,631,128] | 2,048 | 8.19 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_msa_first_row_norm (LayerNorm) | offset: f32[256] | f32[631,256] | f32[631,256] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | scale: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_pair_norm (LayerNorm) | offset: f32[128] | f32[631,631,128] | f32[631,631,128] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | scale: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer._relative_encoding) | | {'aatype': s32[631], | f32[631,631,128] | 91,095,744 | 364.38 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | 'all_atom_mask': s32[631,37], | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'all_atom_positions': f32[631,37,3], | | | | | └ alphafold (AlphaFold) | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[252,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'cluster_deletion_mean': f32[252,631], | | | | | | | 'cluster_profile': f32[252,631,23], | | | | | | | 'deletion_matrix': f32[252,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'extra_bert_mask': f32[5891,631], | | | | | | | 'extra_deletion_matrix': f32[5891,631], | | | | | | | 'extra_msa': s32[5891,631], | | | | | | | 'extra_msa_mask': f32[5891,631], | | | | | | | 'msa': f32[252,631], | | | | | | | 'msa_mask': f32[252,631], | | | | | | | 'msa_profile': f32[631,22], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3], | | | | | | | 'true_msa': s32[252,631]} | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/~_relative_encoding/position_activations (Linear) | weights: f32[73,128] | f32[631,631,73] | f32[631,631,128] | 9,472 | 37.89 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer._relative_encoding) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | is_training=False, multichain_mask_2d=bool[631,631], padding_mask_2d=f32[631,631], query_embedding=f32[631,631,128], safe_key=, template_batch={'template_aatype': s32[4,631], | f32[631,631,128] | 241,344 | 965.38 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | 'template_all_atom_mask': f32[4,631,37], | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'template_all_atom_positions': f32[4,631,37,3]} | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | f32[631,631,128], s32[631], f32[631,37,3], f32[631,37], f32[631,631], bool[631,631], False, | f32[631,631,64] | 233,024 | 932.10 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/query_embedding_norm (LayerNorm) | offset: f32[128] | f32[631,631,128] | f32[631,631,128] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | scale: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_0 (Linear) | weights: f32[39,64] | f32[631,631,39] | f32[631,631,64] | 2,560 | 10.24 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_1 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_2 (Linear) | weights: f32[22,64] | f32[1,631,22] | f32[1,631,64] | 1,472 | 5.89 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_3 (Linear) | weights: f32[22,64] | f32[631,1,22] | f32[631,1,64] | 1,472 | 5.89 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_4 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_5 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_6 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_7 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_8 (Linear) | weights: f32[128,64] | f32[631,631,128] | f32[631,631,64] | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | ((f32[631,631,64], ),), None | (((f32[631,631,64], ),), | 218,240 | 872.96 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | None) | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | act=f32[631,631,64], is_training=False, pair_mask=f32[631,631], safe_key= | f32[631,631,64] | 218,240 | 872.96 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 50,432 | 201.73 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 50,432 | 201.73 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[2,64,4] | f32[631,631,64], f32[631,631] | f32[631,631,64] | 41,984 | 167.94 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,216 | 164.86 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[2,64,4] | f32[631,631,64], f32[631,631] | f32[631,631,64] | 41,984 | 167.94 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,216 | 164.86 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 33,408 | 133.63 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/input_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[3,631,64] | f32[3,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[3,631,64] | f32[3,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[3,631,128] | f32[3,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[4,631,64] | f32[4,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[4,631,128] | f32[4,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[4,631,64] | f32[4,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[4,631,128] | f32[4,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[3,631,64] | f32[3,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[3,631,64] | f32[3,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[3,631,128] | f32[3,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/output_layer_norm (LayerNorm) | offset: f32[64] | f32[631,631,64] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | scale: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/output_linear (Linear) | weights: f32[64,128] | f32[631,631,64] | f32[631,631,128] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_activations (Linear) | weights: f32[25,64] | f32[1152,631,25] | f32[1152,631,64] | 1,664 | 6.66 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | (({'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, | ((({'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, | 2,805,248 | 11.22 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | ),), None | ),), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | None) | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | activations={'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, is_training=False, masks={'msa': f32[1152,631], 'pair': f32[631,631]}, safe_key= | {'msa': f32[1152,631,64], 'pair': f32[631,631,128]} | 2,805,248 | 11.22 MB | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | output_w: f32[4,32,32,128] | f32[1152,631,64], f32[1152,631] | f32[631,631,128] | 541,952 | 2.17 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_b: f32[4,128] | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/layer_norm_input (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/left_projection (Linear) | weights: f32[4,64,32] | f32[1152,631,64] | f32[1152,631,32] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | bias: f32[4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/right_projection (Linear) | weights: f32[4,64,32] | f32[1152,631,64] | f32[1152,631,32] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | bias: f32[4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | feat_2d_weights: f32[4,128,8] | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 88,064 | 352.26 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False, pair_act=f32[631,631,128] | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/query_norm (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/feat_2d_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 82,432 | 329.73 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 86,528 | 346.11 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 86,528 | 346.11 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 54,272 | 217.09 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/query_norm (LayerNorm) | offset: f32[4,64] | f32[631,1152,64] | f32[631,1152,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[3,1152,64], f32[3,1152,64], f32[3,1152,1], f32[3,1,1,1152] | f32[3,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[4,1152,64], f32[4,1152,64], f32[4,1152,1], f32[4,1,1,1152] | f32[4,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[4,1152,64], f32[4,1152,64], f32[4,1152,1], f32[4,1,1,1152] | f32[4,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[3,1152,64], f32[3,1152,64], f32[3,1152,1], f32[3,1,1,1152] | f32[3,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 132,864 | 531.46 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/input_layer_norm (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 398,336 | 1.59 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 398,336 | 1.59 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[4,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 331,776 | 1.33 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 328,704 | 1.31 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[4,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 331,776 | 1.33 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 328,704 | 1.31 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 527,872 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/input_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[3,631,128] | f32[3,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[3,631,512] | f32[3,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[4,631,128] | f32[4,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[4,631,512] | f32[4,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[4,631,128] | f32[4,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[4,631,512] | f32[4,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[3,631,128] | f32[3,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[3,631,512] | f32[3,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_single_embedding (Linear) | weights: f32[34,256] | f32[4,631,34] | f32[4,631,256] | 8,960 | 35.84 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_projection (Linear) | weights: f32[256,256] | f32[4,631,256] | f32[4,631,256] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | (({'msa': f32[256,631,256], 'pair': f32[631,631,128]}, | ((({'msa': f32[256,631,256], 'pair': f32[631,631,128]}, | 87,837,696 | 351.35 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | ),), None | ),), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | None) | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | activations={'msa': f32[256,631,256], 'pair': f32[631,631,128]}, is_training=False, masks={'msa': f32[256,631], 'pair': f32[631,631]}, safe_key= | {'msa': f32[256,631,256], 'pair': f32[631,631,128]} | 87,837,696 | 351.35 MB | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | output_w: f32[48,32,32,128] | f32[256,631,256], f32[256,631] | f32[631,631,128] | 7,111,680 | 28.45 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_b: f32[48,128] | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/layer_norm_input (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/left_projection (Linear) | weights: f32[48,256,32] | f32[256,631,256] | f32[256,631,32] | 394,752 | 1.58 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | bias: f32[48,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/right_projection (Linear) | weights: f32[48,256,32] | f32[256,631,256] | f32[256,631,32] | 394,752 | 1.58 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | bias: f32[48,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | feat_2d_weights: f32[48,128,8] | f32[256,631,256], f32[256,631] | f32[256,631,256] | 15,839,232 | 63.36 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False, pair_act=f32[631,631,128] | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/query_norm (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/feat_2d_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,802,368 | 63.21 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,802,368 | 63.21 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | | f32[256,631,256], f32[256,631] | f32[256,631,256] | 15,777,792 | 63.11 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/query_norm (LayerNorm) | offset: f32[48,256] | f32[631,256,256] | f32[631,256,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[3,256,256], f32[3,256,256], f32[3,1,1,256] | f32[3,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,256,256], f32[4,256,256], f32[4,1,1,256] | f32[4,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,256,256], f32[4,256,256], f32[4,1,1,256] | f32[4,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[3,256,256], f32[3,256,256], f32[3,1,1,256] | f32[3,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | f32[256,631,256], f32[256,631] | f32[256,631,256] | 25,251,840 | 101.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/input_layer_norm (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 4,780,032 | 19.12 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 4,780,032 | 19.12 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[48,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 3,981,312 | 15.93 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,944,448 | 15.78 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[48,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 3,981,312 | 15.93 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,944,448 | 15.78 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 6,334,464 | 25.34 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/input_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[3,631,128] | f32[3,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[3,631,512] | f32[3,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[4,631,128] | f32[4,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[4,631,512] | f32[4,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[4,631,128] | f32[4,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[4,631,512] | f32[4,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[3,631,128] | f32[3,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[3,631,512] | f32[3,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/single_activations (Linear) | weights: f32[256,384] | f32[631,256] | f32[631,384] | 98,688 | 394.75 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | {'aatype': s32[631], | {'msa': f32[252,631,256], | 91,095,744 | 364.38 MB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'all_atom_mask': s32[631,37], | 'msa_first_row': f32[631,256], | | | | └ alphafold (AlphaFold) | | 'all_atom_positions': f32[631,37,3], | 'pair': f32[631,631,128], | | | | | | 'assembly_num_chains': s32[], | 'single': f32[631,384]} | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | | | | safe_key= | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/preprocess_1d (Linear) | weights: f32[21,256] | f32[631,21] | f32[631,256] | 5,632 | 22.53 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/preprocess_msa (Linear) | weights: f32[49,256] | f32[252,631,49] | f32[252,631,256] | 12,800 | 51.20 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/left_single (Linear) | weights: f32[21,128] | f32[631,21] | f32[631,128] | 2,816 | 11.26 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/right_single (Linear) | weights: f32[21,128] | f32[631,21] | f32[631,128] | 2,816 | 11.26 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_pos_linear (Linear) | weights: f32[15,128] | f32[631,631,15] | f32[631,631,128] | 2,048 | 8.19 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_msa_first_row_norm (LayerNorm) | offset: f32[256] | f32[631,256] | f32[631,256] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | scale: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_pair_norm (LayerNorm) | offset: f32[128] | f32[631,631,128] | f32[631,631,128] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | scale: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer._relative_encoding) | | {'aatype': s32[631], | f32[631,631,128] | 91,095,744 | 364.38 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | 'all_atom_mask': s32[631,37], | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'all_atom_positions': f32[631,37,3], | | | | | └ alphafold (AlphaFold) | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[252,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'cluster_deletion_mean': f32[252,631], | | | | | | | 'cluster_profile': f32[252,631,23], | | | | | | | 'deletion_matrix': f32[252,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'extra_bert_mask': f32[5891,631], | | | | | | | 'extra_deletion_matrix': f32[5891,631], | | | | | | | 'extra_msa': s32[5891,631], | | | | | | | 'extra_msa_mask': f32[5891,631], | | | | | | | 'msa': f32[252,631], | | | | | | | 'msa_mask': f32[252,631], | | | | | | | 'msa_profile': f32[631,22], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3], | | | | | | | 'true_msa': s32[252,631]} | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/~_relative_encoding/position_activations (Linear) | weights: f32[73,128] | f32[631,631,73] | f32[631,631,128] | 9,472 | 37.89 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer._relative_encoding) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | is_training=False, multichain_mask_2d=bool[631,631], padding_mask_2d=f32[631,631], query_embedding=f32[631,631,128], safe_key=, template_batch={'template_aatype': s32[4,631], | f32[631,631,128] | 241,344 | 965.38 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | 'template_all_atom_mask': f32[4,631,37], | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'template_all_atom_positions': f32[4,631,37,3]} | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | f32[631,631,128], s32[631], f32[631,37,3], f32[631,37], f32[631,631], bool[631,631], False, | f32[631,631,64] | 233,024 | 932.10 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/query_embedding_norm (LayerNorm) | offset: f32[128] | f32[631,631,128] | f32[631,631,128] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | scale: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_0 (Linear) | weights: f32[39,64] | f32[631,631,39] | f32[631,631,64] | 2,560 | 10.24 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_1 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_2 (Linear) | weights: f32[22,64] | f32[1,631,22] | f32[1,631,64] | 1,472 | 5.89 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_3 (Linear) | weights: f32[22,64] | f32[631,1,22] | f32[631,1,64] | 1,472 | 5.89 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_4 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_5 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_6 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_7 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_8 (Linear) | weights: f32[128,64] | f32[631,631,128] | f32[631,631,64] | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | ((f32[631,631,64], ),), None | (((f32[631,631,64], ),), | 218,240 | 872.96 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | None) | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | act=f32[631,631,64], is_training=False, pair_mask=f32[631,631], safe_key= | f32[631,631,64] | 218,240 | 872.96 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 50,432 | 201.73 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 50,432 | 201.73 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[2,64,4] | f32[631,631,64], f32[631,631] | f32[631,631,64] | 41,984 | 167.94 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,216 | 164.86 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[2,64,4] | f32[631,631,64], f32[631,631] | f32[631,631,64] | 41,984 | 167.94 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,216 | 164.86 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 33,408 | 133.63 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/input_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[3,631,64] | f32[3,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[3,631,64] | f32[3,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[3,631,128] | f32[3,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[4,631,64] | f32[4,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[4,631,128] | f32[4,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[4,631,64] | f32[4,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[4,631,128] | f32[4,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[3,631,64] | f32[3,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[3,631,64] | f32[3,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[3,631,128] | f32[3,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/output_layer_norm (LayerNorm) | offset: f32[64] | f32[631,631,64] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | scale: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/output_linear (Linear) | weights: f32[64,128] | f32[631,631,64] | f32[631,631,128] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_activations (Linear) | weights: f32[25,64] | f32[1152,631,25] | f32[1152,631,64] | 1,664 | 6.66 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | (({'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, | ((({'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, | 2,805,248 | 11.22 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | ),), None | ),), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | None) | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | activations={'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, is_training=False, masks={'msa': f32[1152,631], 'pair': f32[631,631]}, safe_key= | {'msa': f32[1152,631,64], 'pair': f32[631,631,128]} | 2,805,248 | 11.22 MB | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | output_w: f32[4,32,32,128] | f32[1152,631,64], f32[1152,631] | f32[631,631,128] | 541,952 | 2.17 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_b: f32[4,128] | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/layer_norm_input (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/left_projection (Linear) | weights: f32[4,64,32] | f32[1152,631,64] | f32[1152,631,32] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | bias: f32[4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/right_projection (Linear) | weights: f32[4,64,32] | f32[1152,631,64] | f32[1152,631,32] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | bias: f32[4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | feat_2d_weights: f32[4,128,8] | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 88,064 | 352.26 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False, pair_act=f32[631,631,128] | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/query_norm (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/feat_2d_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 82,432 | 329.73 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 86,528 | 346.11 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 86,528 | 346.11 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 54,272 | 217.09 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/query_norm (LayerNorm) | offset: f32[4,64] | f32[631,1152,64] | f32[631,1152,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[3,1152,64], f32[3,1152,64], f32[3,1152,1], f32[3,1,1,1152] | f32[3,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[4,1152,64], f32[4,1152,64], f32[4,1152,1], f32[4,1,1,1152] | f32[4,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[4,1152,64], f32[4,1152,64], f32[4,1152,1], f32[4,1,1,1152] | f32[4,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[3,1152,64], f32[3,1152,64], f32[3,1152,1], f32[3,1,1,1152] | f32[3,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 132,864 | 531.46 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/input_layer_norm (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 398,336 | 1.59 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 398,336 | 1.59 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[4,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 331,776 | 1.33 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 328,704 | 1.31 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[4,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 331,776 | 1.33 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 328,704 | 1.31 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 527,872 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/input_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[3,631,128] | f32[3,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[3,631,512] | f32[3,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[4,631,128] | f32[4,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[4,631,512] | f32[4,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[4,631,128] | f32[4,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[4,631,512] | f32[4,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[3,631,128] | f32[3,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[3,631,512] | f32[3,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_single_embedding (Linear) | weights: f32[34,256] | f32[4,631,34] | f32[4,631,256] | 8,960 | 35.84 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_projection (Linear) | weights: f32[256,256] | f32[4,631,256] | f32[4,631,256] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | (({'msa': f32[256,631,256], 'pair': f32[631,631,128]}, | ((({'msa': f32[256,631,256], 'pair': f32[631,631,128]}, | 87,837,696 | 351.35 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | ),), None | ),), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | None) | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | activations={'msa': f32[256,631,256], 'pair': f32[631,631,128]}, is_training=False, masks={'msa': f32[256,631], 'pair': f32[631,631]}, safe_key= | {'msa': f32[256,631,256], 'pair': f32[631,631,128]} | 87,837,696 | 351.35 MB | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | output_w: f32[48,32,32,128] | f32[256,631,256], f32[256,631] | f32[631,631,128] | 7,111,680 | 28.45 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_b: f32[48,128] | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/layer_norm_input (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/left_projection (Linear) | weights: f32[48,256,32] | f32[256,631,256] | f32[256,631,32] | 394,752 | 1.58 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | bias: f32[48,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/right_projection (Linear) | weights: f32[48,256,32] | f32[256,631,256] | f32[256,631,32] | 394,752 | 1.58 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | bias: f32[48,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | feat_2d_weights: f32[48,128,8] | f32[256,631,256], f32[256,631] | f32[256,631,256] | 15,839,232 | 63.36 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False, pair_act=f32[631,631,128] | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/query_norm (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/feat_2d_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,802,368 | 63.21 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,802,368 | 63.21 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | | f32[256,631,256], f32[256,631] | f32[256,631,256] | 15,777,792 | 63.11 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/query_norm (LayerNorm) | offset: f32[48,256] | f32[631,256,256] | f32[631,256,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[3,256,256], f32[3,256,256], f32[3,1,1,256] | f32[3,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,256,256], f32[4,256,256], f32[4,1,1,256] | f32[4,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,256,256], f32[4,256,256], f32[4,1,1,256] | f32[4,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[3,256,256], f32[3,256,256], f32[3,1,1,256] | f32[3,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | f32[256,631,256], f32[256,631] | f32[256,631,256] | 25,251,840 | 101.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/input_layer_norm (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 4,780,032 | 19.12 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 4,780,032 | 19.12 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[48,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 3,981,312 | 15.93 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,944,448 | 15.78 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[48,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 3,981,312 | 15.93 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,944,448 | 15.78 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 6,334,464 | 25.34 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/input_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[3,631,128] | f32[3,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[3,631,512] | f32[3,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[4,631,128] | f32[4,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[4,631,512] | f32[4,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[4,631,128] | f32[4,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[4,631,512] | f32[4,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[3,631,128] | f32[3,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[3,631,512] | f32[3,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/single_activations (Linear) | weights: f32[256,384] | f32[631,256] | f32[631,384] | 98,688 | 394.75 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module (StructureModule) | | {'msa': f32[252,631,256], | {'act': f32[631,384], | 2,018,540 | 8.07 MB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | 'final_atom_mask': f32[631,37], | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | 'final_atom_positions': f32[631,37,3]} | | | | | | 'single': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/single_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/initial_projection (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/pair_layer_norm (LayerNorm) | offset: f32[128] | f32[631,631,128] | f32[631,631,128] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | scale: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/distogram_head (DistogramHead) | | {'msa': f32[252,631,256], | {'bin_edges': f32[63], 'logits': f32[631,631,64]} | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | | | | | | | 'single': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/distogram_head/half_logits (Linear) | weights: f32[128,64] | f32[631,631,128] | f32[631,631,64] | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration/distogram_head (DistogramHead) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/masked_msa_head (MaskedMsaHead) | | {'msa': f32[252,631,256], | {'logits': f32[252,631,22]} | 5,654 | 22.62 KB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | | | | | | | 'single': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/masked_msa_head/logits (Linear) | weights: f32[256,22] | f32[252,631,256] | f32[252,631,22] | 5,654 | 22.62 KB | | └ alphafold/alphafold_iteration/masked_msa_head (MaskedMsaHead) | bias: f32[22] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_lddt_head (PredictedLDDTHead) | | {'msa': f32[252,631,256], | {'logits': f32[631,50]} | 73,010 | 292.04 KB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | | | | | | | 'single': f32[631,384], | | | | | | | 'structure_module': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_lddt_head/input_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/predicted_lddt_head (PredictedLDDTHead) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_lddt_head/act_0 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/predicted_lddt_head (PredictedLDDTHead) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_lddt_head/act_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/predicted_lddt_head (PredictedLDDTHead) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_lddt_head/logits (Linear) | weights: f32[128,50] | f32[631,128] | f32[631,50] | 6,450 | 25.80 KB | | └ alphafold/alphafold_iteration/predicted_lddt_head (PredictedLDDTHead) | bias: f32[50] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/experimentally_resolved_head (ExperimentallyResolvedHead) | | {'msa': f32[252,631,256], | {'logits': f32[631,37]} | 14,245 | 56.98 KB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | | | | | | | 'single': f32[631,384], | | | | | | | 'structure_module': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/experimentally_resolved_head/logits (Linear) | weights: f32[384,37] | f32[631,384] | f32[631,37] | 14,245 | 56.98 KB | | └ alphafold/alphafold_iteration/experimentally_resolved_head (ExperimentallyResolvedHead) | bias: f32[37] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_aligned_error_head (PredictedAlignedErrorHead) | | {'msa': f32[252,631,256], | {'breaks': f32[63], 'logits': f32[631,631,64]} | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | | | | | | | 'single': f32[631,384], | | | | | | | 'structure_module': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_aligned_error_head/logits (Linear) | weights: f32[128,64] | f32[631,631,128] | f32[631,631,64] | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration/predicted_aligned_error_head (PredictedAlignedErrorHead) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration (AlphaFoldIteration) | | batch={'aatype': s32[631], | {'distogram': {'bin_edges': f32[63], 'logits': f32[631,631,64]}, | 93,223,705 | 372.89 MB | | └ alphafold (AlphaFold) | | 'all_atom_mask': s32[631,37], | 'experimentally_resolved': {'logits': f32[631,37]}, | | | | | | 'all_atom_positions': f32[631,37,3], | 'masked_msa': {'logits': f32[252,631,22]}, | | | | | | 'assembly_num_chains': s32[], | 'predicted_aligned_error': {'asym_id': f32[631], | | | | | | 'asym_id': f32[631], | 'breaks': f32[63], | | | | | | 'bert_mask': f32[6143,631], | 'logits': f32[631,631,64]}, | | | | | | 'cluster_bias_mask': f32[6143], | 'predicted_lddt': {'logits': f32[631,50]}, | | | | | | 'deletion_matrix': f32[6143,631], | 'representations': {'msa': f32[252,631,256], | | | | | | 'deletion_mean': f32[631], | 'msa_first_row': f32[631,256], | | | | | | 'entity_id': f32[631], | 'pair': f32[631,631,128], | | | | | | 'entity_mask': s32[631], | 'single': f32[631,384], | | | | | | 'msa': s32[6143,631], | 'structure_module': f32[631,384]}, | | | | | | 'msa_mask': f32[6143,631], | 'structure_module': {'final_atom_mask': f32[631,37], | | | | | | 'num_alignments': s32[], | 'final_atom_positions': f32[631,37,3]}} | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, is_training=False, safe_key= | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | {'aatype': s32[631], | {'msa': f32[252,631,256], | 91,095,744 | 364.38 MB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'all_atom_mask': s32[631,37], | 'msa_first_row': f32[631,256], | | | | └ alphafold (AlphaFold) | | 'all_atom_positions': f32[631,37,3], | 'pair': f32[631,631,128], | | | | | | 'assembly_num_chains': s32[], | 'single': f32[631,384]} | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/preprocess_1d (Linear) | weights: f32[21,256] | f32[631,21] | f32[631,256] | 5,632 | 22.53 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/preprocess_msa (Linear) | weights: f32[49,256] | f32[252,631,49] | f32[252,631,256] | 12,800 | 51.20 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/left_single (Linear) | weights: f32[21,128] | f32[631,21] | f32[631,128] | 2,816 | 11.26 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/right_single (Linear) | weights: f32[21,128] | f32[631,21] | f32[631,128] | 2,816 | 11.26 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_pos_linear (Linear) | weights: f32[15,128] | f32[631,631,15] | f32[631,631,128] | 2,048 | 8.19 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_msa_first_row_norm (LayerNorm) | offset: f32[256] | f32[631,256] | f32[631,256] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | scale: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_pair_norm (LayerNorm) | offset: f32[128] | f32[631,631,128] | f32[631,631,128] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | scale: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer._relative_encoding) | | {'aatype': s32[631], | f32[631,631,128] | 91,095,744 | 364.38 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | 'all_atom_mask': s32[631,37], | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'all_atom_positions': f32[631,37,3], | | | | | └ alphafold (AlphaFold) | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[252,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'cluster_deletion_mean': f32[252,631], | | | | | | | 'cluster_profile': f32[252,631,23], | | | | | | | 'deletion_matrix': f32[252,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'extra_bert_mask': f32[5891,631], | | | | | | | 'extra_deletion_matrix': f32[5891,631], | | | | | | | 'extra_msa': s32[5891,631], | | | | | | | 'extra_msa_mask': f32[5891,631], | | | | | | | 'msa': f32[252,631], | | | | | | | 'msa_mask': f32[252,631], | | | | | | | 'msa_profile': f32[631,22], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3], | | | | | | | 'true_msa': s32[252,631]} | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/~_relative_encoding/position_activations (Linear) | weights: f32[73,128] | f32[631,631,73] | f32[631,631,128] | 9,472 | 37.89 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer._relative_encoding) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | is_training=False, multichain_mask_2d=bool[631,631], padding_mask_2d=f32[631,631], query_embedding=f32[631,631,128], safe_key=, template_batch={'template_aatype': s32[4,631], | f32[631,631,128] | 241,344 | 965.38 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | 'template_all_atom_mask': f32[4,631,37], | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'template_all_atom_positions': f32[4,631,37,3]} | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | f32[631,631,128], s32[631], f32[631,37,3], f32[631,37], f32[631,631], bool[631,631], False, | f32[631,631,64] | 233,024 | 932.10 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/query_embedding_norm (LayerNorm) | offset: f32[128] | f32[631,631,128] | f32[631,631,128] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | scale: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_0 (Linear) | weights: f32[39,64] | f32[631,631,39] | f32[631,631,64] | 2,560 | 10.24 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_1 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_2 (Linear) | weights: f32[22,64] | f32[1,631,22] | f32[1,631,64] | 1,472 | 5.89 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_3 (Linear) | weights: f32[22,64] | f32[631,1,22] | f32[631,1,64] | 1,472 | 5.89 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_4 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_5 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_6 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_7 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_8 (Linear) | weights: f32[128,64] | f32[631,631,128] | f32[631,631,64] | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | ((f32[631,631,64], ),), None | (((f32[631,631,64], ),), | 218,240 | 872.96 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | None) | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | act=f32[631,631,64], is_training=False, pair_mask=f32[631,631], safe_key= | f32[631,631,64] | 218,240 | 872.96 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 50,432 | 201.73 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 50,432 | 201.73 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[2,64,4] | f32[631,631,64], f32[631,631] | f32[631,631,64] | 41,984 | 167.94 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,216 | 164.86 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[2,64,4] | f32[631,631,64], f32[631,631] | f32[631,631,64] | 41,984 | 167.94 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,216 | 164.86 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 33,408 | 133.63 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/input_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[3,631,64] | f32[3,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[3,631,64] | f32[3,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[3,631,128] | f32[3,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[4,631,64] | f32[4,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[4,631,128] | f32[4,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[4,631,64] | f32[4,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[4,631,128] | f32[4,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[3,631,64] | f32[3,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[3,631,64] | f32[3,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[3,631,128] | f32[3,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/output_layer_norm (LayerNorm) | offset: f32[64] | f32[631,631,64] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | scale: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/output_linear (Linear) | weights: f32[64,128] | f32[631,631,64] | f32[631,631,128] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_activations (Linear) | weights: f32[25,64] | f32[1152,631,25] | f32[1152,631,64] | 1,664 | 6.66 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | (({'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, | ((({'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, | 2,805,248 | 11.22 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | ),), None | ),), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | None) | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | activations={'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, is_training=False, masks={'msa': f32[1152,631], 'pair': f32[631,631]}, safe_key= | {'msa': f32[1152,631,64], 'pair': f32[631,631,128]} | 2,805,248 | 11.22 MB | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | output_w: f32[4,32,32,128] | f32[1152,631,64], f32[1152,631] | f32[631,631,128] | 541,952 | 2.17 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_b: f32[4,128] | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/layer_norm_input (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/left_projection (Linear) | weights: f32[4,64,32] | f32[1152,631,64] | f32[1152,631,32] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | bias: f32[4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/right_projection (Linear) | weights: f32[4,64,32] | f32[1152,631,64] | f32[1152,631,32] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | bias: f32[4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | feat_2d_weights: f32[4,128,8] | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 88,064 | 352.26 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False, pair_act=f32[631,631,128] | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/query_norm (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/feat_2d_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 82,432 | 329.73 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 86,528 | 346.11 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 86,528 | 346.11 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 54,272 | 217.09 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/query_norm (LayerNorm) | offset: f32[4,64] | f32[631,1152,64] | f32[631,1152,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[3,1152,64], f32[3,1152,64], f32[3,1152,1], f32[3,1,1,1152] | f32[3,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[4,1152,64], f32[4,1152,64], f32[4,1152,1], f32[4,1,1,1152] | f32[4,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[4,1152,64], f32[4,1152,64], f32[4,1152,1], f32[4,1,1,1152] | f32[4,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[3,1152,64], f32[3,1152,64], f32[3,1152,1], f32[3,1,1,1152] | f32[3,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 132,864 | 531.46 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/input_layer_norm (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 398,336 | 1.59 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 398,336 | 1.59 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[4,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 331,776 | 1.33 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 328,704 | 1.31 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[4,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 331,776 | 1.33 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 328,704 | 1.31 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 527,872 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/input_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[3,631,128] | f32[3,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[3,631,512] | f32[3,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[4,631,128] | f32[4,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[4,631,512] | f32[4,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[4,631,128] | f32[4,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[4,631,512] | f32[4,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[3,631,128] | f32[3,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[3,631,512] | f32[3,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_single_embedding (Linear) | weights: f32[34,256] | f32[4,631,34] | f32[4,631,256] | 8,960 | 35.84 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_projection (Linear) | weights: f32[256,256] | f32[4,631,256] | f32[4,631,256] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | (({'msa': f32[256,631,256], 'pair': f32[631,631,128]}, | ((({'msa': f32[256,631,256], 'pair': f32[631,631,128]}, | 87,837,696 | 351.35 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | ),), None | ),), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | None) | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | activations={'msa': f32[256,631,256], 'pair': f32[631,631,128]}, is_training=False, masks={'msa': f32[256,631], 'pair': f32[631,631]}, safe_key= | {'msa': f32[256,631,256], 'pair': f32[631,631,128]} | 87,837,696 | 351.35 MB | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | output_w: f32[48,32,32,128] | f32[256,631,256], f32[256,631] | f32[631,631,128] | 7,111,680 | 28.45 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_b: f32[48,128] | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/layer_norm_input (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/left_projection (Linear) | weights: f32[48,256,32] | f32[256,631,256] | f32[256,631,32] | 394,752 | 1.58 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | bias: f32[48,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/right_projection (Linear) | weights: f32[48,256,32] | f32[256,631,256] | f32[256,631,32] | 394,752 | 1.58 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | bias: f32[48,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | feat_2d_weights: f32[48,128,8] | f32[256,631,256], f32[256,631] | f32[256,631,256] | 15,839,232 | 63.36 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False, pair_act=f32[631,631,128] | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/query_norm (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/feat_2d_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,802,368 | 63.21 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,802,368 | 63.21 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | | f32[256,631,256], f32[256,631] | f32[256,631,256] | 15,777,792 | 63.11 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/query_norm (LayerNorm) | offset: f32[48,256] | f32[631,256,256] | f32[631,256,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[3,256,256], f32[3,256,256], f32[3,1,1,256] | f32[3,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,256,256], f32[4,256,256], f32[4,1,1,256] | f32[4,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,256,256], f32[4,256,256], f32[4,1,1,256] | f32[4,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[3,256,256], f32[3,256,256], f32[3,1,1,256] | f32[3,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | f32[256,631,256], f32[256,631] | f32[256,631,256] | 25,251,840 | 101.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/input_layer_norm (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 4,780,032 | 19.12 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 4,780,032 | 19.12 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[48,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 3,981,312 | 15.93 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,944,448 | 15.78 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[48,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 3,981,312 | 15.93 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,944,448 | 15.78 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 6,334,464 | 25.34 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/input_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[3,631,128] | f32[3,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[3,631,512] | f32[3,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[4,631,128] | f32[4,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[4,631,512] | f32[4,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[4,631,128] | f32[4,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[4,631,512] | f32[4,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[3,631,128] | f32[3,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[3,631,512] | f32[3,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/single_activations (Linear) | weights: f32[256,384] | f32[631,256] | f32[631,384] | 98,688 | 394.75 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | {'aatype': s32[631], | {'msa': f32[252,631,256], | 91,095,744 | 364.38 MB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'all_atom_mask': s32[631,37], | 'msa_first_row': f32[631,256], | | | | └ alphafold (AlphaFold) | | 'all_atom_positions': f32[631,37,3], | 'pair': f32[631,631,128], | | | | | | 'assembly_num_chains': s32[], | 'single': f32[631,384]} | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | | | | safe_key= | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/preprocess_1d (Linear) | weights: f32[21,256] | f32[631,21] | f32[631,256] | 5,632 | 22.53 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/preprocess_msa (Linear) | weights: f32[49,256] | f32[252,631,49] | f32[252,631,256] | 12,800 | 51.20 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/left_single (Linear) | weights: f32[21,128] | f32[631,21] | f32[631,128] | 2,816 | 11.26 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/right_single (Linear) | weights: f32[21,128] | f32[631,21] | f32[631,128] | 2,816 | 11.26 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_pos_linear (Linear) | weights: f32[15,128] | f32[631,631,15] | f32[631,631,128] | 2,048 | 8.19 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_msa_first_row_norm (LayerNorm) | offset: f32[256] | f32[631,256] | f32[631,256] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | scale: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/prev_pair_norm (LayerNorm) | offset: f32[128] | f32[631,631,128] | f32[631,631,128] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | scale: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer._relative_encoding) | | {'aatype': s32[631], | f32[631,631,128] | 91,095,744 | 364.38 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | 'all_atom_mask': s32[631,37], | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'all_atom_positions': f32[631,37,3], | | | | | └ alphafold (AlphaFold) | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[252,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'cluster_deletion_mean': f32[252,631], | | | | | | | 'cluster_profile': f32[252,631,23], | | | | | | | 'deletion_matrix': f32[252,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'extra_bert_mask': f32[5891,631], | | | | | | | 'extra_deletion_matrix': f32[5891,631], | | | | | | | 'extra_msa': s32[5891,631], | | | | | | | 'extra_msa_mask': f32[5891,631], | | | | | | | 'msa': f32[252,631], | | | | | | | 'msa_mask': f32[252,631], | | | | | | | 'msa_profile': f32[631,22], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3], | | | | | | | 'true_msa': s32[252,631]} | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/~_relative_encoding/position_activations (Linear) | weights: f32[73,128] | f32[631,631,73] | f32[631,631,128] | 9,472 | 37.89 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer._relative_encoding) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | is_training=False, multichain_mask_2d=bool[631,631], padding_mask_2d=f32[631,631], query_embedding=f32[631,631,128], safe_key=, template_batch={'template_aatype': s32[4,631], | f32[631,631,128] | 241,344 | 965.38 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | 'template_all_atom_mask': f32[4,631,37], | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'template_all_atom_positions': f32[4,631,37,3]} | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | f32[631,631,128], s32[631], f32[631,37,3], f32[631,37], f32[631,631], bool[631,631], False, | f32[631,631,64] | 233,024 | 932.10 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/query_embedding_norm (LayerNorm) | offset: f32[128] | f32[631,631,128] | f32[631,631,128] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | scale: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_0 (Linear) | weights: f32[39,64] | f32[631,631,39] | f32[631,631,64] | 2,560 | 10.24 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_1 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_2 (Linear) | weights: f32[22,64] | f32[1,631,22] | f32[1,631,64] | 1,472 | 5.89 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_3 (Linear) | weights: f32[22,64] | f32[631,1,22] | f32[631,1,64] | 1,472 | 5.89 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_4 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_5 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_6 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_7 (Linear) | bias: f32[64] | f32[631,631] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | weights: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_pair_embedding_8 (Linear) | weights: f32[128,64] | f32[631,631,128] | f32[631,631,64] | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | ((f32[631,631,64], ),), None | (((f32[631,631,64], ),), | 218,240 | 872.96 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | None) | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | act=f32[631,631,64], is_training=False, pair_mask=f32[631,631], safe_key= | f32[631,631,64] | 218,240 | 872.96 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 50,432 | 201.73 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 50,432 | 201.73 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[2,64,64] | f32[631,631,64] | f32[631,631,64] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[2,64,4] | f32[631,631,64], f32[631,631] | f32[631,631,64] | 41,984 | 167.94 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,216 | 164.86 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[2,64,4] | f32[631,631,64], f32[631,631] | f32[631,631,64] | 41,984 | 167.94 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,216 | 164.86 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[4,631,631] | f32[4,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[2,64,4,16] | f32[3,631,64], f32[3,631,64], f32[3,1,1,631], f32[4,631,631] | f32[3,631,64] | 41,728 | 166.91 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | output_w: f32[2,4,16,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | value_w: f32[2,64,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | gating_b: f32[2,4,16] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | output_b: f32[2,64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | f32[631,631,64], f32[631,631] | f32[631,631,64] | 33,408 | 133.63 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/input_layer_norm (LayerNorm) | offset: f32[2,64] | f32[631,631,64] | f32[631,631,64] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | scale: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[3,631,64] | f32[3,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[3,631,64] | f32[3,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[3,631,128] | f32[3,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[4,631,64] | f32[4,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[4,631,128] | f32[4,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[4,631,64] | f32[4,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[4,631,128] | f32[4,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | | f32[3,631,64] | f32[3,631,64] | 33,152 | 132.61 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition1 (Linear) | weights: f32[2,64,128] | f32[3,631,64] | f32[3,631,128] | 16,640 | 66.56 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/transition2 (Linear) | weights: f32[2,128,64] | f32[3,631,128] | f32[3,631,64] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition/sequential (Sequential) | bias: f32[2,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/template_embedding_iteration (TemplateEmbeddingIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding/output_layer_norm (LayerNorm) | offset: f32[64] | f32[631,631,64] | f32[631,631,64] | 128 | 512.00 B | | └ alphafold/alphafold_iteration/evoformer/template_embedding/single_template_embedding (SingleTemplateEmbedding) | scale: f32[64] | | | | | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_embedding/output_linear (Linear) | weights: f32[64,128] | f32[631,631,64] | f32[631,631,128] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/template_embedding (TemplateEmbedding) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_activations (Linear) | weights: f32[25,64] | f32[1152,631,25] | f32[1152,631,64] | 1,664 | 6.66 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | (({'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, | ((({'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, | 2,805,248 | 11.22 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | ),), None | ),), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | None) | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | activations={'msa': f32[1152,631,64], 'pair': f32[631,631,128]}, is_training=False, masks={'msa': f32[1152,631], 'pair': f32[631,631]}, safe_key= | {'msa': f32[1152,631,64], 'pair': f32[631,631,128]} | 2,805,248 | 11.22 MB | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | output_w: f32[4,32,32,128] | f32[1152,631,64], f32[1152,631] | f32[631,631,128] | 541,952 | 2.17 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_b: f32[4,128] | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/layer_norm_input (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/left_projection (Linear) | weights: f32[4,64,32] | f32[1152,631,64] | f32[1152,631,32] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | bias: f32[4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean/right_projection (Linear) | weights: f32[4,64,32] | f32[1152,631,64] | f32[1152,631,32] | 8,320 | 33.28 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/outer_product_mean (OuterProductMean) | bias: f32[4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | feat_2d_weights: f32[4,128,8] | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 88,064 | 352.26 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False, pair_act=f32[631,631,128] | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/query_norm (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/feat_2d_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 82,432 | 329.73 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 86,528 | 346.11 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[4,64,8,8] | f32[4,631,64], f32[4,631,64], f32[4,1,1,631], f32[8,631,631] | f32[4,631,64] | 86,528 | 346.11 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 54,272 | 217.09 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/query_norm (LayerNorm) | offset: f32[4,64] | f32[631,1152,64] | f32[631,1152,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[3,1152,64], f32[3,1152,64], f32[3,1152,1], f32[3,1,1,1152] | f32[3,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[4,1152,64], f32[4,1152,64], f32[4,1152,1], f32[4,1,1,1152] | f32[4,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[4,1152,64], f32[4,1152,64], f32[4,1152,1], f32[4,1,1,1152] | f32[4,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention/attention (GlobalAttention) | gating_w: f32[4,64,8,8] | f32[3,1152,64], f32[3,1152,64], f32[3,1152,1], f32[3,1,1,1152] | f32[3,1152,64] | 53,760 | 215.04 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_column_global_attention (MSAColumnGlobalAttention) | output_w: f32[4,8,8,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | query_w: f32[4,64,8,8] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | key_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,64,8] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,8,8] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,64] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | f32[1152,631,64], f32[1152,631] | f32[1152,631,64] | 132,864 | 531.46 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/input_layer_norm (LayerNorm) | offset: f32[4,64] | f32[1152,631,64] | f32[1152,631,64] | 512 | 2.05 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | scale: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | | f32[4,631,64] | f32[4,631,64] | 132,352 | 529.41 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition1 (Linear) | weights: f32[4,64,256] | f32[4,631,64] | f32[4,631,256] | 66,560 | 266.24 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/transition2 (Linear) | weights: f32[4,256,64] | f32[4,631,256] | f32[4,631,64] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition/sequential (Sequential) | bias: f32[4,64] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 398,336 | 1.59 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 398,336 | 1.59 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[4,128,128] | f32[631,631,128] | f32[631,631,128] | 66,048 | 264.19 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[4,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 331,776 | 1.33 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 328,704 | 1.31 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_starting_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[4,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 331,776 | 1.33 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 328,704 | 1.31 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node/attention (Attention) | gating_w: f32[4,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 330,752 | 1.32 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/triangle_attention_ending_node (TriangleAttention) | key_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | output_w: f32[4,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | query_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[4,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[4,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[4,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 527,872 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/input_layer_norm (LayerNorm) | offset: f32[4,128] | f32[631,631,128] | f32[631,631,128] | 1,024 | 4.10 KB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | scale: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[3,631,128] | f32[3,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[3,631,512] | f32[3,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[4,631,128] | f32[4,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[4,631,512] | f32[4,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[4,631,128] | f32[4,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[4,631,512] | f32[4,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 526,848 | 2.11 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition1 (Linear) | weights: f32[4,128,512] | f32[3,631,128] | f32[3,631,512] | 264,192 | 1.06 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/transition2 (Linear) | weights: f32[4,512,128] | f32[3,631,512] | f32[3,631,128] | 262,656 | 1.05 MB | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition/sequential (Sequential) | bias: f32[4,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/extra_msa_stack (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_single_embedding (Linear) | weights: f32[34,256] | f32[4,631,34] | f32[4,631,256] | 8,960 | 35.84 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/template_projection (Linear) | weights: f32[256,256] | f32[4,631,256] | f32[4,631,256] | 65,792 | 263.17 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[256] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | (({'msa': f32[256,631,256], 'pair': f32[631,631,128]}, | ((({'msa': f32[256,631,256], 'pair': f32[631,631,128]}, | 87,837,696 | 351.35 MB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | ),), None | ),), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | None) | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | activations={'msa': f32[256,631,256], 'pair': f32[631,631,128]}, is_training=False, masks={'msa': f32[256,631], 'pair': f32[631,631]}, safe_key= | {'msa': f32[256,631,256], 'pair': f32[631,631,128]} | 87,837,696 | 351.35 MB | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | output_w: f32[48,32,32,128] | f32[256,631,256], f32[256,631] | f32[631,631,128] | 7,111,680 | 28.45 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_b: f32[48,128] | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/layer_norm_input (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/left_projection (Linear) | weights: f32[48,256,32] | f32[256,631,256] | f32[256,631,32] | 394,752 | 1.58 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | bias: f32[48,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean/right_projection (Linear) | weights: f32[48,256,32] | f32[256,631,256] | f32[256,631,32] | 394,752 | 1.58 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/outer_product_mean (OuterProductMean) | bias: f32[48,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | feat_2d_weights: f32[48,128,8] | f32[256,631,256], f32[256,631] | f32[256,631,256] | 15,839,232 | 63.36 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False, pair_act=f32[631,631,128] | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/query_norm (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/feat_2d_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,802,368 | 63.21 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,631,256], f32[4,631,256], f32[4,1,1,631], f32[8,631,631] | f32[4,631,256] | 15,802,368 | 63.21 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_row_attention_with_pair_bias (MSARowAttentionWithPairBias) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | | f32[256,631,256], f32[256,631] | f32[256,631,256] | 15,777,792 | 63.11 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/query_norm (LayerNorm) | offset: f32[48,256] | f32[631,256,256] | f32[631,256,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[3,256,256], f32[3,256,256], f32[3,1,1,256] | f32[3,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,256,256], f32[4,256,256], f32[4,1,1,256] | f32[4,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[4,256,256], f32[4,256,256], f32[4,1,1,256] | f32[4,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention/attention (Attention) | gating_w: f32[48,256,8,32] | f32[3,256,256], f32[3,256,256], f32[3,1,1,256] | f32[3,256,256] | 15,753,216 | 63.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_column_attention (MSAColumnAttention) | key_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,8,32,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,256,8,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,8,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,256] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | f32[256,631,256], f32[256,631] | f32[256,631,256] | 25,251,840 | 101.01 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/input_layer_norm (LayerNorm) | offset: f32[48,256] | f32[256,631,256] | f32[256,631,256] | 24,576 | 98.30 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | scale: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | | f32[4,631,256] | f32[4,631,256] | 25,227,264 | 100.91 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition1 (Linear) | weights: f32[48,256,1024] | f32[4,631,256] | f32[4,631,1024] | 12,632,064 | 50.53 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,1024] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/transition2 (Linear) | weights: f32[48,1024,256] | f32[4,631,1024] | f32[4,631,256] | 12,595,200 | 50.38 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition/sequential (Sequential) | bias: f32[48,256] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/msa_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 4,780,032 | 19.12 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/layer_norm_input (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/left_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/right_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/left_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/right_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/center_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/output_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing/gating_linear (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_outgoing (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 4,780,032 | 19.12 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/layer_norm_input (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/left_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/right_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/left_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/right_gate (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/center_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/output_projection (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming/gating_linear (Linear) | weights: f32[48,128,128] | f32[631,631,128] | f32[631,631,128] | 792,576 | 3.17 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_multiplication_incoming (TriangleMultiplication) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | feat_2d_weights: f32[48,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 3,981,312 | 15.93 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/query_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,944,448 | 15.78 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_starting_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | feat_2d_weights: f32[48,128,4] | f32[631,631,128], f32[631,631] | f32[631,631,128] | 3,981,312 | 15.93 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/query_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,944,448 | 15.78 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[4,631,128], f32[4,631,128], f32[4,1,1,631], f32[4,631,631] | f32[4,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node/attention (Attention) | gating_w: f32[48,128,4,32] | f32[3,631,128], f32[3,631,128], f32[3,1,1,631], f32[4,631,631] | f32[3,631,128] | 3,969,024 | 15.88 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/triangle_attention_ending_node (TriangleAttention) | key_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | output_w: f32[48,4,32,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | query_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | value_w: f32[48,128,4,32] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | gating_b: f32[48,4,32] | | | | | | └ alphafold (AlphaFold) | output_b: f32[48,128] | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | f32[631,631,128], f32[631,631] | f32[631,631,128] | 6,334,464 | 25.34 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | is_training=False | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/input_layer_norm (LayerNorm) | offset: f32[48,128] | f32[631,631,128] | f32[631,631,128] | 12,288 | 49.15 KB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | scale: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[3,631,128] | f32[3,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[3,631,512] | f32[3,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[4,631,128] | f32[4,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[4,631,512] | f32[4,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[4,631,128] | f32[4,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[4,631,128] | f32[4,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[4,631,512] | f32[4,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | | f32[3,631,128] | f32[3,631,128] | 6,322,176 | 25.29 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition1 (Linear) | weights: f32[48,128,512] | f32[3,631,128] | f32[3,631,512] | 3,170,304 | 12.68 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,512] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/transition2 (Linear) | weights: f32[48,512,128] | f32[3,631,512] | f32[3,631,128] | 3,151,872 | 12.61 MB | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition/sequential (Sequential) | bias: f32[48,128] | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration/pair_transition (Transition) | | | | | | | └ alphafold/alphafold_iteration/evoformer/evoformer_iteration (EvoformerIteration) | | | | | | | └ alphafold/alphafold_iteration/evoformer/__layer_stack_no_state_1 (_LayerStackNoState) | | | | | | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/evoformer/single_activations (Linear) | weights: f32[256,384] | f32[631,256] | f32[631,384] | 98,688 | 394.75 KB | | └ alphafold/alphafold_iteration/evoformer (EmbeddingsAndEvoformer) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module (StructureModule) | | {'msa': f32[252,631,256], | {'act': f32[631,384], | 2,018,540 | 8.07 MB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | 'final_atom_mask': f32[631,37], | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | 'final_atom_positions': f32[631,37,3]} | | | | | | 'single': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/single_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/initial_projection (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/pair_layer_norm (LayerNorm) | offset: f32[128] | f32[631,631,128] | f32[631,631,128] | 256 | 1.02 KB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | scale: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | {'act': f32[631,384], | ({'act': f32[631,384], | 1,869,676 | 7.48 MB | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))} | 'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631]))}, | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | aatype=s32[631], initial_act=f32[631,384], is_training=False, safe_key=, sequence_mask=f32[631,1], static_feat_2d=f32[631,631,128], update_rigid=True | {'rigid': Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), | | | | └ alphafold (AlphaFold) | | | 'sc': {'angles_sin_cos': f32[631,7,2], | | | | | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | | | | 'unnormalized_angles_sin_cos': f32[631,7,2]}}) | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | trainable_point_weights: f32[12] | inputs_1d=f32[631,384], inputs_2d=f32[631,631,128], mask=f32[631,1], rigid=Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | f32[631,384] | 1,255,896 | 5.02 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,4], y=f32[631,12,4], z=f32[631,12,4]) | 55,452 | 221.81 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection/point_projection (Linear) | weights: f32[384,12,12] | f32[631,384] | f32[631,12,12] | 55,440 | 221.76 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_point_projection (PointProjection) | bias: f32[12,12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/q_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/k_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/attention_2d (Linear) | weights: f32[128,12] | f32[631,631,128] | f32[631,631,12] | 1,548 | 6.19 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[12] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_scalar_projection (Linear) | weights: f32[384,12,16] | f32[631,384] | f32[631,12,16] | 73,728 | 294.91 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | | f32[631,384], Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | Vec3Array(x=f32[631,12,8], y=f32[631,12,8], z=f32[631,12,8]) | 110,892 | 443.57 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection/point_projection (Linear) | weights: f32[384,12,24] | f32[631,384] | f32[631,12,24] | 110,880 | 443.52 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/v_point_projection (PointProjection) | bias: f32[12,24] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention/output_projection (Linear) | weights: f32[2112,384] | f32[631,2112] | f32[631,384] | 811,392 | 3.25 MB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/invariant_point_attention (InvariantPointAttention) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/attention_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_1 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_2 (Linear) | weights: f32[384,384] | f32[631,384] | f32[631,384] | 147,840 | 591.36 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | bias: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/transition_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | | f32[631,384] | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])) | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid/rigid (Linear) | weights: f32[384,6] | f32[631,384] | f32[631,6] | 2,310 | 9.24 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/quat_rigid (QuatRigid) | bias: f32[6] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | | Rigid3Array(rotation=Rot3Array(xx=f32[631], xy=f32[631], xz=f32[631], yx=f32[631], yy=f32[631], yz=f32[631], zx=f32[631], zy=f32[631], zz=f32[631]), translation=Vec3Array(x=f32[631], y=f32[631], z=f32[631])), [f32[631,384], f32[631,384]], s32[631] | {'angles_sin_cos': f32[631,7,2], | 166,414 | 665.66 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | 'atom_pos': Vec3Array(x=f32[631,14], y=f32[631,14], z=f32[631,14]), | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | 'frames': Rigid3Array(rotation=Rot3Array(xx=f32[631,8], xy=f32[631,8], xz=f32[631,8], yx=f32[631,8], yy=f32[631,8], yz=f32[631,8], zx=f32[631,8], zy=f32[631,8], zz=f32[631,8]), translation=Vec3Array(x=f32[631,8], y=f32[631,8], z=f32[631,8])), | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | 'unnormalized_angles_sin_cos': f32[631,7,2]} | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/input_projection_1 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock1_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/resblock2_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain/unnormalized_angles (Linear) | weights: f32[128,14] | f32[631,128] | f32[631,14] | 1,806 | 7.22 KB | | └ alphafold/alphafold_iteration/structure_module/fold_iteration/rigid_sidechain (MultiRigidSidechain) | bias: f32[14] | | | | | | └ alphafold/alphafold_iteration/structure_module/fold_iteration (FoldIteration) | | | | | | | └ alphafold/alphafold_iteration/structure_module (StructureModule) | | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/distogram_head (DistogramHead) | | {'msa': f32[252,631,256], | {'bin_edges': f32[63], 'logits': f32[631,631,64]} | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | | | | | | | 'single': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/distogram_head/half_logits (Linear) | weights: f32[128,64] | f32[631,631,128] | f32[631,631,64] | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration/distogram_head (DistogramHead) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/masked_msa_head (MaskedMsaHead) | | {'msa': f32[252,631,256], | {'logits': f32[252,631,22]} | 5,654 | 22.62 KB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | | | | | | | 'single': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/masked_msa_head/logits (Linear) | weights: f32[256,22] | f32[252,631,256] | f32[252,631,22] | 5,654 | 22.62 KB | | └ alphafold/alphafold_iteration/masked_msa_head (MaskedMsaHead) | bias: f32[22] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_lddt_head (PredictedLDDTHead) | | {'msa': f32[252,631,256], | {'logits': f32[631,50]} | 73,010 | 292.04 KB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | | | | | | | 'single': f32[631,384], | | | | | | | 'structure_module': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_lddt_head/input_layer_norm (LayerNorm) | offset: f32[384] | f32[631,384] | f32[631,384] | 768 | 3.07 KB | | └ alphafold/alphafold_iteration/predicted_lddt_head (PredictedLDDTHead) | scale: f32[384] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_lddt_head/act_0 (Linear) | weights: f32[384,128] | f32[631,384] | f32[631,128] | 49,280 | 197.12 KB | | └ alphafold/alphafold_iteration/predicted_lddt_head (PredictedLDDTHead) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_lddt_head/act_1 (Linear) | weights: f32[128,128] | f32[631,128] | f32[631,128] | 16,512 | 66.05 KB | | └ alphafold/alphafold_iteration/predicted_lddt_head (PredictedLDDTHead) | bias: f32[128] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_lddt_head/logits (Linear) | weights: f32[128,50] | f32[631,128] | f32[631,50] | 6,450 | 25.80 KB | | └ alphafold/alphafold_iteration/predicted_lddt_head (PredictedLDDTHead) | bias: f32[50] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/experimentally_resolved_head (ExperimentallyResolvedHead) | | {'msa': f32[252,631,256], | {'logits': f32[631,37]} | 14,245 | 56.98 KB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | | | | | | | 'single': f32[631,384], | | | | | | | 'structure_module': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/experimentally_resolved_head/logits (Linear) | weights: f32[384,37] | f32[631,384] | f32[631,37] | 14,245 | 56.98 KB | | └ alphafold/alphafold_iteration/experimentally_resolved_head (ExperimentallyResolvedHead) | bias: f32[37] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_aligned_error_head (PredictedAlignedErrorHead) | | {'msa': f32[252,631,256], | {'breaks': f32[63], 'logits': f32[631,631,64]} | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | 'msa_first_row': f32[631,256], | | | | | └ alphafold (AlphaFold) | | 'pair': f32[631,631,128], | | | | | | | 'single': f32[631,384], | | | | | | | 'structure_module': f32[631,384]}, {'aatype': s32[631], | | | | | | | 'all_atom_mask': s32[631,37], | | | | | | | 'all_atom_positions': f32[631,37,3], | | | | | | | 'assembly_num_chains': s32[], | | | | | | | 'asym_id': f32[631], | | | | | | | 'bert_mask': f32[6143,631], | | | | | | | 'cluster_bias_mask': f32[6143], | | | | | | | 'deletion_matrix': f32[6143,631], | | | | | | | 'deletion_mean': f32[631], | | | | | | | 'entity_id': f32[631], | | | | | | | 'entity_mask': s32[631], | | | | | | | 'msa': s32[6143,631], | | | | | | | 'msa_mask': f32[6143,631], | | | | | | | 'num_alignments': s32[], | | | | | | | 'num_templates': s32[], | | | | | | | 'prev_msa_first_row': f32[631,256], | | | | | | | 'prev_pair': f32[631,631,128], | | | | | | | 'prev_pos': f32[631,37,3], | | | | | | | 'residue_index': s32[631], | | | | | | | 'seq_length': s32[], | | | | | | | 'seq_mask': f32[631], | | | | | | | 'sym_id': f32[631], | | | | | | | 'template_aatype': s32[4,631], | | | | | | | 'template_all_atom_mask': f32[4,631,37], | | | | | | | 'template_all_atom_positions': f32[4,631,37,3]}, False | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+ | alphafold/alphafold_iteration/predicted_aligned_error_head/logits (Linear) | weights: f32[128,64] | f32[631,631,128] | f32[631,631,64] | 8,256 | 33.02 KB | | └ alphafold/alphafold_iteration/predicted_aligned_error_head (PredictedAlignedErrorHead) | bias: f32[64] | | | | | | └ alphafold/alphafold_iteration (AlphaFoldIteration) | | | | | | | └ alphafold (AlphaFold) | | | | | | +----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+----------------------------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------------+---------------+